Sunday 8 April 2012

LAB 2 MOHAMMAD SHAFIQ BIN ABDULLAH 113569


2.1 OCULAR MICROMETER

INTRODUCTION
Your microscope may be equipped with a scale (called a reticule) that is built into one eyepiece. The reticule can be used to measure any planar dimension in a microscope field since the ocular can be turned in any direction and the object of interest can be repositioned with the stage manipulators. To measure the length of an object note the number of ocular divisions spanned by the object. Then multiply by the conversion factor for the magnification used. The conversion factor is different at each magnification. Therefore, when using a reticule for the first time, it is necessary to calibrate the scale by focusing on a second micrometer scale (a stage micrometer) placed directly on the stage.

Instructions
             Measure the actual size of the letter on the microscope slide using the millimeter ruler. This measurement will help you calibrate the ocular micrometer to determine if it is giving you accurate measurements.
              Attach the ocular micrometer to the microscope eyepiece by unscrewing the eyepiece cap, placing the ocular micrometer over the lens and screwing the eyepiece cap back into place. Some microscopes may have an ocular micrometer pre-installed, allowing you to skip this step.
             Slide the stage micrometer onto the microscope slide stage. Adjust the microscope to the lowest possible magnification, which should bring the grid on the stage micrometer into focus.
Move the stage micrometer until the measurement marks on the ocular micrometer align with the measurement marks on the stage micrometer. The measurement "0" on the ocular micrometer should line up with the measurement "0.0" on the stage micrometer.
Count the number of measurement marks until the measurements of both the micrometers line up again. At 4x magnification (the lowest setting on most microscopes), the two micrometers will line up again at "3" on the ocular micrometer and "0.3" on the stage micrometer.
Write down the number of measurement marks between the aligning measurements for the two micrometers. The distance between measurement marks is 0.01 mm, so you can now determine the distance between coinciding measurement marks. Repeat the exercise at higher magnifications (10x, 40x and 100x), and record these values as well.
Use the calibrated ocular micrometer to measure the dimensions of the letter printed on your slide. Compare the dimensions to the dimensions you measured with the millimeter ruler to ensure that the ocular micrometer is functioning properly.

OBJECTIVE

To measure and count cells using a microscope



RESULTS
1A)      lactobacillus








2B)      yeast






           400x magnification
        1000x magnification
calibrate
Stage micrometer
Ocular division
Stage micrometer
Ocular divison
0.03 mm
39 division
0.09 mm
96 division
7.69 x10⁻⁴ mm
1 division
9.38x10⁻⁴ mm
1 division
0.769 µm
1 division
0.94 µm
1 division
YEAST :
400x magnification
       4 division x 0.769 µm
       =3.076 µm
1000x magnification
       7 division x 0.94 µm
       = 6.58 µm

LACTOBACILLUS :
400x magnification
       2 division x 0.769 µm
       =1.538 µm
1000x magnification
      5 division x 0.94 µm
      =4.7 µm


DISCUSSION

Identify the ocular micrometer. A typical scale consists of 50 - 100 divisions. You may have to adjust the focus of your eyepiece in order to make the scale as sharp as possible. If you do that, also adjust the other eyepiece to match the focus. Any ocular scale must be calibrated, using a device called a stage micrometer. A stage micrometer is simply a microscope slide with a scale etched on the surface. A typical micrometer scale is 2 mm long and at least part of it should be etched with divisions of 0.01 mm (10 µm).






 
Suppose that a stage micrometer scale has divisions that are equal to 0.1 mm, which is 100 micrometers (µm). Suppose that the scale is lined up with the ocular scale, and at 100x it is observed that each micrometer division covers the same distance as 10 ocular divisions. Then one ocular division (smallest increment on the scale) = 10 µm at 100 power. The conversion to other magnifications is accomplished by factoring in the difference in magnification. In the example, the calibration would be 25 µm at 40x, 2.5 µm at 400x, and 1 µm at 1000x.

Some stage micrometers are finely divided only at one end. These are particularly useful for determining the diameter of a microscope field. One of the larger divisions is positioned at one edge of the field of view, so that the fine part of the scale ovelaps the opposite side. The field diameter can then be determined to the maximum available precision.



 
CONCLUSION

In many areas of experimental science, including biosciences, the ability to estimate and make reasonable assumptions is a valuable skill. In order to make some quantitative estimates, particularly of volumes, you will have to make assumptions regarding the shape of some organisms. For example, if a specimen appears round, you would likely make your volume calculation based on the assumption that the specimen is a perfect sphere. For something like a Paramecium you might assume a cylindrical shape in order to simplify your estimate, while remaining aware that you could be way off the mark.

A specimen such as Chaos (Pelomyxa) carolinensis represents a real challenge. Ameoboid organisms are irregularly shaped most of the time. Is it flat on the slide, or does it extend up toward the coverslip? Perhaps it is attached to both. What model do you use as a basis for volume estimation? Is it best to assume a particular shape and take measurements at different times? Is it best to estimate a maximum and minimum for each possible dimension and obtain a range of possible volumes? Remember, you are only asked to estimate. Sometimes the best estimates have a potential error of more than an order of magnitude.

When you change magnifications, it appears as though the size of the stage micrometer is changing while the ocular micrometer remains fixed. Both micrometers actually stay fixed, but the view of the stage micrometer becomes distorted as the magnification changes.

REFERENCE



2.2 NEUBAUER CHAMBER

INTRODUCTION

For microbiology, cell culture, and many applications that require use of suspensions of cells it is necessary to determine cell concentration. One can often determine cell density of a suspension spectrophotometrically, however that form of determination does not allow an assessment of cell viability, nor can one distinguish cell types.
 
A device used for determining the number of cells per unit volume of a suspension is called a counting chamber. The most widely used type of chamber is called a hemocytometer, since it was originally designed for performing blood cell counts.





To prepare the counting chamber the mirror-like polished surface is carefully cleaned with lens paper. The coverslip is also cleaned. Coverslips for counting chambers are specially made and are thicker than those for conventional microscopy, since they must be heavy enough to overcome the surface tension of a drop of liquid. The coverslip is placed over the counting surface prior to putting on the cell suspension. The suspension is introduced into one of the V-shaped wells with a pasteur or other type of pipet. The area under the coverslip fills by capillary action. Enough liquid should be introduced so that the mirrored surface is just covered. The charged counting chamber is then placed on the microscope stage and the counting grid is brought into focus at low power.






OBJECTIVE

To measure and count cells using a microscope


RESULTS

experiment is as shown below :
   390 ÷ 10 = 39

Volume = 0.02 x 0.02 x 0.01 mm
               = 4 x 103 mm
               = 4 x 106 cm
   = 4 x 10-6 ml

1ml = 39 ÷ (4 x 10-6 )
       = 9.75 x 10-5 cells/ml
3 x 0.01 = 0.03 nm
39 divisions = 0.03 ÷ 39
                     = 7.69 x 10-4 mm per division
                     = 0.769 µm per division

It is essential to be extremely careful with higher power objectives, since the counting chamber is much thicker than a conventional slide. The chamber or an objective lens may be damaged if the user is not not careful. One entire grid on standard hemacytometers with Neubauer rulings can be seen at 40x (4x objective). The main divisions separate the grid into 9 large squares (like a tic-tac-toe grid). Each square has a surface area of one square mm, and the depth of the chamber is 0.1 mm. Thus the entire counting grid lies under a volume of 0.9 mm-cubed.

Suspensions should be dilute enough so that the cells or other particles do not overlap each other on the grid, and should be uniformly distributed. To perform the count, determine the magnification needed to recognize the desired cell type. Now systematically count the cells in selected squares so that the total count is 100 cells or so (number of cells needed for a statistically significant count). For large cells this may mean counting the four large corner squares and the middle one. For a dense suspension of small cells you may wish to count the cells in the four 1/25 sq. mm corners plus the middle square in the central square. Always decide on a specific counting patter to avoid bias. For cells that overlap a ruling, count a cell as "in" if it overlaps the top or right ruling, and "out" if it overlaps the bottom or left ruling.


CONCLUSION

The original suspension must be mixed thoroughly before taking a sample. This ensures the sample is representative, and not just an artifact of the particular region of the original mixture it was drawn from.
An appropriate dilution of the mixture with regard to the number of cells to be counted should be used. If the sample is not diluted enough, the cells will be too crowded and difficult to count. If it is too dilute, the sample size will not be enough to make strong inferences about the concentration in the original mixture.
By performing a redundant test on a second chamber, the results can be compared. If they differ greatly, the method of taking the sample may be unreliable (e.g., the original mixture is not mixed thoroughly).

REFERENCE

No comments:

Post a Comment